Searching in Escherichia coli BW25113 (Keio)
Found 12 curated entries in PaperBLAST's database that match '4.1.2.19' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Escherichia coli BW25113, or try another query
| b3902: rhamnulose-1-phosphate aldolase (NCBI) is similar to: | PaperBLAST |
RHAD_ECOLI / P32169: Rhamnulose-1-phosphate aldolase; EC 4.1.2.19 from Escherichia coli | 100% id, 100% cov |
BWI76_RS00670: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Klebsiella michiganensis | 88% id, 99% cov |
BT3766: rhamnulose 1-phosphate aldolase RhaD (EC 4.1.2.19) from Bacteroides thetaiotaomicron | 32% id, 90% cov |
| b0596: 2,3-dihydroxybenzoate-2,3-dehydrogenase (NCBI) is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 31% id, 37% cov |
| b1093: 3-oxoacyl-[acyl-carrier-protein] reductase (NCBI) is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 30% id, 37% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 29% id, 36% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 33% id, 27% cov |
| b3003: oxidoreductase (NCBI) is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 28% id, 37% cov |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 27% id, 37% cov |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 32% id, 28% cov |
| b2541: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase (NCBI) is similar to: | PaperBLAST |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 26% id, 39% cov |
| b2842: 2-deoxy-D-gluconate 3-dehydrogenase (NCBI) is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 34% id, 26% cov |
| b2774: putative oxidoreductase (VIMSS) is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 30% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 627696-628514 (frame +3) on 7023 is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 31% id, 39% cov |
Lawrence Berkeley National Laboratory