Searching in Escherichia coli BW25113 (Keio)
Found 13 curated entries in PaperBLAST's database that match '4.1.2.29' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Escherichia coli BW25113, or try another query
| b3137: tagatose 6-phosphate aldolase 1, kbaY subunit (NCBI) is similar to: | PaperBLAST |
IOLJ_BACSU / P42420: 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase; DKGP aldolase; EC 4.1.2.29 from Bacillus subtilis | 38% id, 98% cov |
PGA1_c07220: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) from Phaeobacter inhibens | 30% id, 91% cov |
| b1773: predicted aldolase (NCBI) is similar to: | PaperBLAST |
IOLJ_BACSU / P42420: 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase; DKGP aldolase; EC 4.1.2.29 from Bacillus subtilis | 37% id, 94% cov |
PGA1_c07220: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) from Phaeobacter inhibens | 32% id, 84% cov |
| b2096: tagatose-bisphosphate aldolase 1 (VIMSS) is similar to: | PaperBLAST |
IOLJ_BACSU / P42420: 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase; DKGP aldolase; EC 4.1.2.29 from Bacillus subtilis | 35% id, 98% cov |
PGA1_c07220: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) from Phaeobacter inhibens | 28% id, 100% cov |
| b2925: fructose-bisphosphate aldolase (NCBI) is similar to: | PaperBLAST |
IOLJ_BACSU / P42420: 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase; DKGP aldolase; EC 4.1.2.29 from Bacillus subtilis | 28% id, 89% cov |
| b1772: putative kinase (VIMSS) is similar to: | PaperBLAST |
Pf6N2E2_512: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens | 26% id, 51% cov |
AO356_23160: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens | 26% id, 51% cov |
AO353_21335: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens | 25% id, 51% cov |
| b3752: ribokinase (NCBI) is similar to: | PaperBLAST |
BWI76_RS03085: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Klebsiella michiganensis | 24% id, 51% cov |
| b2166: predicted kinase (NCBI) is similar to: | PaperBLAST |
BWI76_RS03085: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Klebsiella michiganensis | 23% id, 48% cov |
PS417_11850: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas simiae | 28% id, 15% cov |
AO353_21335: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens | 27% id, 15% cov |
| b3052: fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) is similar to: | PaperBLAST |
iolC-DUF2090 / A0A0H3C6B4: bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase (EC 2.7.1.92; EC 4.1.2.29) from Caulobacter vibrioides | 28% id, 29% cov |
| b3374: fructoselysine 6-kinase (NCBI) is similar to: | PaperBLAST |
AO356_23160: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens | 25% id, 27% cov |
PS417_11850: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas simiae | 24% id, 27% cov |
Pf6N2E2_512: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens | 25% id, 22% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2256383-2257342 (frame -1) on 7023 is similar to: | PaperBLAST |
BWI76_RS03085: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Klebsiella michiganensis | 23% id, 49% cov |
Lawrence Berkeley National Laboratory