Curated BLAST
Searching in Escherichia coli BW25113 (Keio)
Found 27 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Escherichia coli BW25113, or try another query
b4381: deoxyribose-phosphate aldolase (NCBI) is similar to: | PaperBLAST |
DEOC_ECOLI / P0A6L0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Escherichia coli Tlr / b4381: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli deoC / P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli | 100% id, 100% cov |
DEOC_SALTY / Q8ZJV8: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Salmonella typhimurium | 97% id, 100% cov |
Q7WT44: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Klebsiella pneumoniae | 95% id, 100% cov |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 38% id, 91% cov |
A0A125YLW2: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Toxoplasma gondii | 37% id, 92% cov |
DEOC_ACIB4 / B5IEU6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aciduliprofundum boonei | 37% id, 91% cov |
D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis | 33% id, 100% cov |
Q9AIP7: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus mutans | 36% id, 89% cov |
DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis Q877I0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Thermococcus kodakarensis | 35% id, 92% cov |
DEOC_BACSU / P39121: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Bacillus subtilis | 35% id, 91% cov |
DEOC_HUMAN / Q9Y315: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Homo sapiens Q9Y315: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Homo sapiens | 38% id, 81% cov |
DEOC_THET8 / Q5SJ28: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermus thermophilus | 31% id, 95% cov |
A0A1Q2T258: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Haloarcula japonica | 29% id, 81% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory