Searching in Escherichia coli BW25113 (Keio)
Found 59 curated entries in PaperBLAST's database that match '4.1.3.4'.
These curated entries have 34 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Escherichia coli BW25113, or try another query
| b4039: chorismate lyase (VIMSS) is similar to: | PaperBLAST |
UBIC_ECOLI / P26602: Chorismate pyruvate-lyase; CL; CPL; EC 4.1.3.40 from Escherichia coli | 100% id, 100% cov |
| b1850: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) is similar to: | PaperBLAST |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 100% id, 100% cov |
| b0352: 4-hydroxy-2-ketovalerate aldolase (NCBI) is similar to: | PaperBLAST |
HOA4_PARXL / P51015: 4-hydroxy-2-oxovalerate aldolase 4; HOA 4; 4-hydroxy-2-keto-pentanoic acid aldolase 4; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase 4; EC 4.1.3.39; EC 4.1.3.43 from Paraburkholderia xenovorans | 58% id, 97% cov |
tesG / Q83VZ3: 4-hydroxy-2-oxohexanoate aldolase (EC 4.1.3.43) from Comamonas testosteroni | 57% id, 95% cov |
hsaF / Q0S815: 4-hydroxy-2-oxohexanoate aldolase (EC 4.1.3.43) from Rhodococcus jostii | 53% id, 98% cov |
| b0616: citrate lyase beta chain (acyl lyase subunit) (VIMSS) is similar to: | PaperBLAST |
A0A172MLA1: (S)-citramalyl-CoA lyase (EC 4.1.3.25); (R)-citramalyl-CoA lyase (EC 4.1.3.46) from Aspergillus terreus | 34% id, 96% cov |
| b4477: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) is similar to: | PaperBLAST |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 25% id, 99% cov |
| b0074: 2-isopropylmalate synthase (NCBI) is similar to: | PaperBLAST |
CCL_CHLAA / A9WGE2: (R)-citramalyl-CoA lyase; EC 4.1.3.46 from Chloroflexus aurantiacus | 24% id, 95% cov |
HOA_THET8 / Q53WI0: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC 4.1.3.39; EC 4.1.3.43 from Thermus thermophilus | 32% id, 70% cov |
HOA4_PARXL / P51015: 4-hydroxy-2-oxovalerate aldolase 4; HOA 4; 4-hydroxy-2-keto-pentanoic acid aldolase 4; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase 4; EC 4.1.3.39; EC 4.1.3.43 from Paraburkholderia xenovorans | 26% id, 73% cov |
| b0036: crotonobetainyl CoA hydratase (RefSeq) is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 32% id, 43% cov |
| b1394: enoyl-CoA hydratase (NCBI) is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 27% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory