Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 10 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b3708: tryptophanase (VIMSS)
is similar to:

TNAA_ECOLI / P0A853: Tryptophanase; L-tryptophan indole-lyase; TNase; EC from Escherichia coli
TnaA / b3708: tryptophanase (EC; EC; EC from Escherichia coli
tnaA / P0A853: tryptophanase (EC; EC from Escherichia coli
P0A853: tryptophanase (EC from Escherichia coli

100% id,
100% cov

A5EYI0: tryptophanase (EC from Vibrio cholerae

85% id,
100% cov

Q6LP64: tryptophanase (EC from Photobacterium profundum

84% id,
97% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory