Searching in Escherichia coli BW25113 (Keio)
Found 7 curated entries in PaperBLAST's database that match '4.2.1.42' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Escherichia coli BW25113, or try another query
b3128: (D)-galactarate dehydrogenase (NCBI) is similar to: | PaperBLAST |
GARD_ECOLI / P39829: Galactarate dehydratase (L-threo-forming); GalcD; EC 4.2.1.42 from Escherichia coli | 100% id, 100% cov |
HSERO_RS15800: Galactarate dehydratase (EC 4.2.1.42) from Herbaspirillum seropedicae | 67% id, 97% cov |
PS417_04210: Galactarate dehydratase (EC 4.2.1.42) from Pseudomonas simiae | 63% id, 98% cov |
b3091: altronate hydrolase (NCBI) is similar to: | PaperBLAST |
PS417_04210: Galactarate dehydratase (EC 4.2.1.42) from Pseudomonas simiae | 34% id, 97% cov |
GARD_ECOLI / P39829: Galactarate dehydratase (L-threo-forming); GalcD; EC 4.2.1.42 from Escherichia coli | 32% id, 96% cov |
HSERO_RS15800: Galactarate dehydratase (EC 4.2.1.42) from Herbaspirillum seropedicae | 31% id, 93% cov |
b1581: predicted dehydratase (NCBI) is similar to: | PaperBLAST |
TAGAD_SALTY / Q8ZL58: L-talarate/galactarate dehydratase; TalrD/GalrD; StTGD; EC 4.2.1.156; EC 4.2.1.42 from Salmonella typhimurium | 32% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory