Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 33 curated entries in PaperBLAST's database that match '4.2.1.51' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Escherichia coli BW25113, or try another query

b2599: fused chorismate mutase P/prephenate dehydratase (NCBI)
is similar to:
PaperBLAST

CMPDT_ECOLI / P0A9J8: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli
PheA / b2599: fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli
CH_024084: P-protein; EC 4.2.1.51; EC 5.4.99.5 from Escherichia coli
pheA / P0A9J8: fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli

100% id,
100% cov

C7EXK8: prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Escherichia coli

100% id,
100% cov

CMPDT_BUCAI / P57472: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Buchnera aphidicola
P57472: prephenate dehydratase (EC 4.2.1.51) from Buchnera aphidicola

48% id,
100% cov

More...

b1920: cystine transporter subunit (NCBI)
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

26% id,
94% cov

b0863: arginine transporter subunit (NCBI)
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

25% id,
74% cov

b0811: glutamine ABC transporter periplasmic protein (NCBI)
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

25% id,
71% cov

b2310: lysine/arginine/ornithine transporter subunit (NCBI)
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

23% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory