Searching in Escherichia coli BW25113 (Keio)
Found 6 curated entries in PaperBLAST's database that match '4.2.1.68' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Escherichia coli BW25113, or try another query
| b3128: (D)-galactarate dehydrogenase (NCBI) is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 31% id, 92% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 32% id, 71% cov |
| b3091: altronate hydrolase (NCBI) is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 29% id, 93% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 35% id, 75% cov |
| b2247: predicted enolase (RefSeq) is similar to: | PaperBLAST |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 27% id, 30% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3869879-3871045 (frame -1) on 7023 is similar to: | PaperBLAST |
G3Y683: L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger | 27% id, 57% cov |
Lawrence Berkeley National Laboratory