Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 13 curated entries in PaperBLAST's database that match '4.2.3.5' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b2329: chorismate synthase (NCBI)
is similar to:
PaperBLAST

AROC_ECOLI / P12008: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EPSP phospholyase; EC 4.2.3.5 from Escherichia coli
AroC / b2329: chorismate synthase (EC 4.2.3.5) from Escherichia coli
aroC / P12008: chorismate synthase (EC 4.2.3.5) from Escherichia coli

100% id,
100% cov

AROC_YEAST / P28777: Chorismate synthase; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Saccharomyces cerevisiae

46% id,
98% cov

AROC_HELPY / P56122: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Helicobacter pylori

46% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory