Searching in Escherichia coli BW25113 (Keio)
Found 22 curated entries in PaperBLAST's database that match '4.3.1.18' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Escherichia coli BW25113, or try another query
| b2366: D-serine dehydratase (NCBI) is similar to: | PaperBLAST |
SDHD_ECOLI / P00926: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli | 100% id, 100% cov |
SDHD_ECOL6 / Q8FFF4: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli | 99% id, 100% cov |
Q8ZL08: D-Serine ammonia-lyase (EC 4.3.1.18) from Salmonella enterica | 89% id, 100% cov |
| b1919: putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 41% id, 95% cov |
| b3117: threonine dehydratase (NCBI) is similar to: | PaperBLAST |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Schizosaccharomyces pombe | 40% id, 97% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 38% id, 98% cov |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Arabidopsis thaliana | 39% id, 94% cov |
| b3772: threonine dehydratase (NCBI) is similar to: | PaperBLAST |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Arabidopsis thaliana | 35% id, 89% cov |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Schizosaccharomyces pombe | 34% id, 93% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 33% id, 92% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory