Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 11 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b2804: L-fucose mutarotase (NCBI)
is similar to:

FUCM_ECOLI / P0AEN8: L-fucose mutarotase; D-ribose pyranase; Fucose 1-epimerase; Type-2 mutarotase; EC; EC from Escherichia coli
FucU / b2804: L-fucose mutarotase (EC; EC from Escherichia coli
fucU / P0AEN8: L-fucose mutarotase (EC; EC from Escherichia coli
P0AEN8: L-fucose mutarotase (EC; D-ribose pyranase (EC from Escherichia coli

100% id,
100% cov

FUCM_MOUSE / Q8R2K1: Fucose mutarotase; EC from Mus musculus
Q8R2K1: L-fucose mutarotase (EC; D-ribose pyranase (EC from Mus musculus

50% id,
94% cov

FUCM_HUMAN / A2VDF0: Fucose mutarotase; EC from Homo sapiens
A2VDF0: L-fucose mutarotase (EC from Homo sapiens

48% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory