Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 15 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b3903: L-rhamnose isomerase (NCBI)
is similar to:

RHAA_ECOLI / P32170: L-rhamnose isomerase; RhamIso; EC from Escherichia coli
RhaA / b3903: L-rhamnose isomerase (EC from Escherichia coli
rhaA / P32170: L-rhamnose isomerase (EC from Escherichia coli
P32170: L-rhamnose isomerase (EC from Escherichia coli

100% id,
100% cov

BWI76_RS00675: L-rhamnose isomerase (EC from Klebsiella michiganensis

92% id,
100% cov

Dshi_2437: L-rhamnose isomerase (EC from Dinoroseobacter shibae

56% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory