Curated BLAST

Curated BLAST for Genomes

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b3880: orf, hypothetical protein (VIMSS) is similar to:	PaperBLAST
SquS / b3880: sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli yihS / P32140: sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli	100% id, 100% cov
AO353_03400: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens	47% id, 97% cov
PS417_22150: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas simiae	47% id, 96% cov
Pf1N1B4_597: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens	47% id, 96% cov
AO356_05200: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens	46% id, 96% cov
MANI_THEFU / A0A077LPS9: D-mannose isomerase; EC 5.3.1.7 from Thermobifida fusca	45% id, 99% cov
MANI_PSEC1 / A0A0P9JFY5: D-mannose isomerase; PsMIaseA; EC 5.3.1.7 from Pseudomonas cannabina	45% id, 98% cov
PGA1_c16670: D-mannose isomerase (EC 5.3.1.7) from Phaeobacter inhibens	34% id, 95% cov
MANI_MARM1 / F2JVT6: D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea	29% id, 94% cov
BPHYT_RS02050: D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans	30% id, 92% cov
Sama_0560: D-mannose isomerase (EC 5.3.1.7) from Shewanella amazonensis	28% id, 97% cov
HSERO_RS03650: Mannose isomerase (EC 5.3.1.7) from Herbaspirillum seropedicae	28% id, 92% cov
Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp.	29% id, 89% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory