Searching in Escherichia coli BW25113 (Keio)
Found 18 curated entries in PaperBLAST's database that match '5.4.2.7' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Escherichia coli BW25113, or try another query
b4383: phosphopentomutase (NCBI) is similar to: | PaperBLAST |
Tlr / b4383: phosphopentomutase (EC 5.4.2.7) from Escherichia coli | 100% id, 100% cov |
SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis | 71% id, 100% cov |
Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae | 49% id, 100% cov |
b3380: predicted mutase (NCBI) is similar to: | PaperBLAST |
Q9WY14: phosphopentomutase (EC 5.4.2.7) from Thermotoga maritima | 29% id, 98% cov |
Q818Z9: phosphopentomutase (EC 5.4.2.7) from Bacillus cereus | 35% id, 43% cov |
B3ITC5: phosphopentomutase (EC 5.4.2.7) from Lysinibacillus sphaericus | 36% id, 42% cov |
b2048: phosphomannomutase (NCBI) is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 27% id, 99% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 26% id, 39% cov |
b3176: phosphoglucosamine mutase (NCBI) is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 33% id, 66% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 22% id, 71% cov |
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae | 23% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory