Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 7 curated entries in PaperBLAST's database that match '6.2.1.27'.

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Escherichia coli BW25113, or try another query

b1805: acyl-CoA synthase (NCBI)
is similar to:
PaperBLAST

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

31% id,
83% cov

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

25% id,
98% cov

Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp.

28% id,
70% cov

More...

b1701: short chain acyl-CoA synthetase, anaerobic (RefSeq)
is similar to:
PaperBLAST

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

27% id,
93% cov

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris

26% id,
92% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

27% id,
89% cov

More...

b0594: 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex (NCBI)
is similar to:
PaperBLAST

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris

25% id,
93% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

25% id,
92% cov

b2836: 2-acyl-glycerophospho-ethanolamine acyltransferase (NCBI)
is similar to:
PaperBLAST

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

25% id,
90% cov

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris

26% id,
87% cov

Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp.

27% id,
68% cov

b4069: acetyl-coenzyme A synthetase (NCBI)
is similar to:
PaperBLAST

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

24% id,
92% cov

b0037: predicted crotonobetaine CoA ligase:carnitine CoA ligase (RefSeq)
is similar to:
PaperBLAST

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

31% id,
63% cov

b0335: predicted propionyl-CoA synthetase with ATPase domain (NCBI)
is similar to:
PaperBLAST

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

24% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory