Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 3 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b0852: ribosomal protein S6 modification protein (NCBI)
is similar to:

Q5JFW0: lysyltransferase (EC; [amino group carrier protein]-L-2-aminoadipate ligase (EC; glutamate---[amino group carrier protein] ligase (EC from Thermococcus kodakarensis

28% id,
100% cov

argX / Q4J8E7: glutamate--LysW ligase monomer (EC from Sulfolobus acidocaldarius
Q4J8E7: glutamate---[amino group carrier protein] ligase (EC from Sulfolobus acidocaldarius

27% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory