Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Escherichia coli BW25113, or try another query

b0674: asparagine synthetase B (NCBI) is similar to:	PaperBLAST
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	100% id, 100% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	56% id, 99% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	57% id, 97% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	57% id, 97% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	57% id, 96% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	57% id, 94% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	57% id, 94% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	57% id, 94% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	55% id, 96% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	55% id, 96% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	55% id, 96% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	56% id, 94% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	56% id, 94% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	52% id, 100% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	56% id, 94% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	55% id, 95% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	55% id, 95% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	55% id, 95% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	55% id, 95% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	55% id, 94% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	55% id, 94% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	54% id, 96% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	54% id, 92% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	52% id, 94% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	49% id, 99% cov
ASNS_MOUSE / Q61024: Asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Mus musculus	37% id, 100% cov
ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens	37% id, 100% cov
Asns / P49088: asparagine synthetase subunit (EC 6.3.5.4) from Rattus norvegicus	38% id, 94% cov
Q2L9S5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Bombyx mori	37% id, 94% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	30% id, 75% cov
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	29% id, 64% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	40% id, 27% cov
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	41% id, 24% cov
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	29% id, 21% cov
More...

b3744: asparagine synthetase AsnA (NCBI) is similar to:	PaperBLAST
A4I213: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Leishmania infantum	56% id, 96% cov

b3729: D-fructose-6-phosphate amidotransferase (NCBI) is similar to:	PaperBLAST
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	33% id, 21% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	25% id, 27% cov
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	27% id, 17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory