Searching in Escherichia coli BW25113 (Keio)
Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Escherichia coli BW25113, or try another query
| b1619: 7-alpha-hydroxysteroid dehydrogenase (NCBI) is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 34% id, 98% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 94% cov |
| b2426: putative oxidoreductase (VIMSS) is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 33% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 33% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 33% id, 94% cov |
| b4249: predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (NCBI) is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 31% id, 94% cov |
| b2774: putative oxidoreductase (VIMSS) is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 96% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 96% cov |
| b0596: 2,3-dihydroxybenzoate-2,3-dehydrogenase (NCBI) is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 95% cov |
| b4266: gluconate 5-dehydrogenase (NCBI) is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 27% id, 95% cov |
| b2705: 3-ketoacyl-(acyl-carrier-protein) reductase (NCBI) is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 93% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 93% cov |
| b2902: predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain (NCBI) is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 93% cov |
| b3003: oxidoreductase (NCBI) is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 27% id, 98% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 26% id, 95% cov |
| b0493: short chain dehydrogenase (NCBI) is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 26% id, 85% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 25% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory