Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Escherichia coli BW25113, or try another query

b1264: anthranilate synthase component I (NCBI)
is similar to:
PaperBLAST

TRPE_ECOLI / P00895: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Escherichia coli

100% id,
100% cov

TRPE_SALTY / P00898: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Salmonella typhimurium

90% id,
100% cov

TRPE_SERMA / P00897: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Serratia marcescens

71% id,
100% cov

More...

b1812: para-aminobenzoate synthase component I (NCBI)
is similar to:
PaperBLAST

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

35% id,
90% cov

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

32% id,
90% cov

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

34% id,
85% cov

More...

b2265: isochorismate hydroxymutase 2, menaquinone biosynthesis (VIMSS)
is similar to:
PaperBLAST

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

30% id,
62% cov

TRPE_ARATH / P32068: Anthranilate synthase alpha subunit 1, chloroplastic; Anthranilate synthase component 1-1; Anthranilate synthase component I-1; Protein A-METHYL TRYPTOPHAN RESISTANT 1; Protein JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1; Protein TRYPTOPHAN BIOSYNTHESIS 5; Protein WEAK ETHYLENE INSENSITIVE 2; EC 4.1.3.27 from Arabidopsis thaliana

25% id,
57% cov

b0593: isochorismate synthase (NCBI)
is similar to:
PaperBLAST

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

29% id,
63% cov

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

29% id,
53% cov

TRPE_ARATH / P32068: Anthranilate synthase alpha subunit 1, chloroplastic; Anthranilate synthase component 1-1; Anthranilate synthase component I-1; Protein A-METHYL TRYPTOPHAN RESISTANT 1; Protein JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1; Protein TRYPTOPHAN BIOSYNTHESIS 5; Protein WEAK ETHYLENE INSENSITIVE 2; EC 4.1.3.27 from Arabidopsis thaliana

26% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory