Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0552: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

29% id,
97% cov

BWI76_RS03095: Inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella michiganensis

24% id,
95% cov

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

24% id,
93% cov

More...

Ga0059261_3108: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

23% id,
96% cov

Ga0059261_0656: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

29% id,
73% cov

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

30% id,
55% cov

Ga0059261_0530: 4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae

24% id,
84% cov

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

28% id,
43% cov

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

28% id,
42% cov

More...

Ga0059261_1621: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

26% id,
66% cov

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

22% id,
67% cov

AO356_23190: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

30% id,
38% cov

More...

Ga0059261_3126: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

BWI76_RS03095: Inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella michiganensis

28% id,
41% cov

PS417_11875: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas simiae

29% id,
40% cov

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

30% id,
37% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory