Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) is similar to:	PaperBLAST
Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis	100% id, 100% cov
DHOM_NEIG1 / Q5F8J4: NAD(+)-dependent homoserine dehydrogenase; NAD(+)-dependent HSD; NgHSD; EC 1.1.1.3 from Neisseria gonorrhoeae	45% id, 96% cov
Q56R01: homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus	40% id, 100% cov
P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae	42% id, 93% cov
DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum	42% id, 92% cov
DvMF_1412: homoserine dehydrogenase (EC 1.1.1.3) from Desulfovibrio vulgaris	39% id, 97% cov
Q5SL04: homoserine dehydrogenase (EC 1.1.1.3) from Thermus thermophilus	38% id, 95% cov
D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus	37% id, 95% cov
DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis P19582: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus subtilis	37% id, 95% cov
DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis	35% id, 96% cov
D8WXQ2: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus	39% id, 81% cov
A0A0H2WVX4: homoserine dehydrogenase (EC 1.1.1.3) from Staphylococcus aureus	40% id, 74% cov
F9VNG5: homoserine dehydrogenase (EC 1.1.1.3) from Sulfurisphaera tokodaii	30% id, 99% cov
O58802: homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii	29% id, 96% cov
Q3S3F6: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max	27% id, 69% cov
DHOM_EMENI / Q5B998: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Emericella nidulans AN2882: homoserine dehydrogenase; EC 1.1.1.3 from Emericella nidulans	26% id, 64% cov
Q5AIA2: homoserine dehydrogenase (EC 1.1.1.3) from Candida albicans	26% id, 64% cov
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima	38% id, 42% cov
C1GTZ6: homoserine dehydrogenase (EC 1.1.1.3) from Paracoccidioides lutzii	29% id, 45% cov
C1G1C3: homoserine dehydrogenase (EC 1.1.1.3) from Paracoccidioides brasiliensis	29% id, 45% cov
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis	28% id, 37% cov
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max	29% id, 24% cov
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana	28% id, 25% cov
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana	27% id, 24% cov
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Ga0059261_2519: aspartate kinase (EC 2.7.2.4) is similar to:	PaperBLAST
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima	39% id, 54% cov
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.	29% id, 46% cov
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis	31% id, 42% cov
BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron	27% id, 48% cov
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli P00561: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Escherichia coli	31% id, 41% cov
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana	29% id, 38% cov
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana	29% id, 38% cov
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max	28% id, 38% cov
MetM / b3940: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli metL / P00562: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli	27% id, 26% cov
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Ga0059261_0186: uridylate kinase (EC 2.7.4.22) is similar to:	PaperBLAST
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana	27% id, 20% cov
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana	27% id, 18% cov
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max	27% id, 18% cov
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima	31% id, 14% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory