Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).
These curated entries have 24 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_3340: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) is similar to: | PaperBLAST |
F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis | 31% id, 90% cov |
A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum | 25% id, 88% cov |
XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis | 23% id, 93% cov |
| Ga0059261_2833: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) is similar to: | PaperBLAST |
F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis | 31% id, 90% cov |
| Ga0059261_0885: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) is similar to: | PaperBLAST |
F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis | 32% id, 86% cov |
| Ga0059261_3355: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) is similar to: | PaperBLAST |
F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis | 26% id, 89% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2944117-2945736 (frame -3) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis | 30% id, 95% cov |
| 3486561-3487601 (frame -1) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis | 26% id, 93% cov |
Lawrence Berkeley National Laboratory