Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 7 curated entries in PaperBLAST's database that match '1.1.1.376' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_1621: Predicted dehydrogenases and related proteins is similar to: | PaperBLAST |
ARAA_AZOBR / Q53TZ2: L-arabinose 1-dehydrogenase (NAD(P)(+)); D-galactose 1-dehydrogenase; EC 1.1.1.376; EC 1.1.1.120; EC 1.1.1.48 from Azospirillum brasilense | 53% id, 99% cov |
| Ga0059261_0656: Predicted dehydrogenases and related proteins is similar to: | PaperBLAST |
ARAA_AZOBR / Q53TZ2: L-arabinose 1-dehydrogenase (NAD(P)(+)); D-galactose 1-dehydrogenase; EC 1.1.1.376; EC 1.1.1.120; EC 1.1.1.48 from Azospirillum brasilense | 28% id, 91% cov |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 22% id, 76% cov |
| Ga0059261_3108: Predicted dehydrogenases and related proteins is similar to: | PaperBLAST |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 23% id, 96% cov |
ARAA_AZOBR / Q53TZ2: L-arabinose 1-dehydrogenase (NAD(P)(+)); D-galactose 1-dehydrogenase; EC 1.1.1.376; EC 1.1.1.120; EC 1.1.1.48 from Azospirillum brasilense | 22% id, 88% cov |
| Ga0059261_0552: Predicted dehydrogenases and related proteins is similar to: | PaperBLAST |
ARAA_AZOBR / Q53TZ2: L-arabinose 1-dehydrogenase (NAD(P)(+)); D-galactose 1-dehydrogenase; EC 1.1.1.376; EC 1.1.1.120; EC 1.1.1.48 from Azospirillum brasilense | 29% id, 62% cov |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 25% id, 72% cov |
| Ga0059261_0530: 4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.1.1.-) is similar to: | PaperBLAST |
ARAA_AZOBR / Q53TZ2: L-arabinose 1-dehydrogenase (NAD(P)(+)); D-galactose 1-dehydrogenase; EC 1.1.1.376; EC 1.1.1.120; EC 1.1.1.48 from Azospirillum brasilense | 27% id, 48% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3245897-3247195 (frame +2) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 23% id, 98% cov |
Lawrence Berkeley National Laboratory