Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2630: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

47% id,
99% cov

Ga0059261_0844: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

34% id,
99% cov

Ga0059261_3382: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

35% id,
96% cov

Ga0059261_2655: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
99% cov

Ga0059261_3792: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
99% cov

Ga0059261_0364: 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
99% cov

Ga0059261_1900: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
99% cov

Ga0059261_1894: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
97% cov

Ga0059261_2846: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
96% cov

Ga0059261_2637: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
96% cov

Ga0059261_1451: 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
95% cov

Ga0059261_2825: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
97% cov

Ga0059261_2801: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
99% cov

Ga0059261_2882: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
97% cov

Ga0059261_0812: Short-chain alcohol dehydrogenase of unknown specificity
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
99% cov

Ga0059261_2771: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
96% cov

Ga0059261_2665: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
98% cov

Ga0059261_0843: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
98% cov

Ga0059261_2855: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
100% cov

Ga0059261_3648: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
92% cov

Ga0059261_3625: Short-chain dehydrogenases of various substrate specificities
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

26% id,
93% cov

Ga0059261_0158: short chain dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

26% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory