Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 44 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2836: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
is similar to:

6PGD2_ORYSJ / Q2R480: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; OsG6PGH2; EC from Oryza sativa

25% id,
41% cov

6PGD3_ARATH / Q9FFR3: 6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic; EC from Arabidopsis thaliana
Q9FFR3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC from Arabidopsis thaliana

24% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory