Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 14 curated entries in PaperBLAST's database that match '1.1.1.71' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 31 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2135: Zn-dependent alcohol dehydrogenases
is similar to:
PaperBLAST

Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum

46% id,
96% cov

Ga0059261_0812: Short-chain alcohol dehydrogenase of unknown specificity
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

36% id,
88% cov

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

38% id,
15% cov

Ga0059261_3625: Short-chain dehydrogenases of various substrate specificities
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

32% id,
92% cov

Ga0059261_2605: Threonine dehydrogenase and related Zn-dependent dehydrogenases
is similar to:
PaperBLAST

Q9HMB6: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp.

30% id,
95% cov

Ga0059261_2041: Short-chain alcohol dehydrogenase of unknown specificity
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

27% id,
98% cov

Ga0059261_3382: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

31% id,
78% cov

CBR1_HUMAN / P16152: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; Short chain dehydrogenase/reductase family 21C member 1; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Homo sapiens

35% id,
50% cov

Ga0059261_3792: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

28% id,
88% cov

Ga0059261_0660: Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

32% id,
76% cov

Ga0059261_1451: 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

27% id,
90% cov

Ga0059261_2825: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

27% id,
87% cov

Ga0059261_0844: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

27% id,
88% cov

Ga0059261_2655: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

28% id,
78% cov

Ga0059261_2966: 2-deoxy-D-gluconate 3-dehydrogenase
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

27% id,
78% cov

Ga0059261_2905: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

25% id,
80% cov

Ga0059261_2906: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

25% id,
80% cov

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

30% id,
51% cov

Ga0059261_3648: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

27% id,
74% cov

Ga0059261_2665: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

31% id,
65% cov

Ga0059261_2801: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

25% id,
79% cov

Ga0059261_2771: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

28% id,
71% cov

Ga0059261_0364: 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

29% id,
65% cov

Ga0059261_2846: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

25% id,
76% cov

Ga0059261_2855: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

28% id,
63% cov

Ga0059261_0843: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

CBR1_MOUSE / P48758: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Mus musculus

34% id,
50% cov

CBR1_HUMAN / P16152: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; Short chain dehydrogenase/reductase family 21C member 1; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Homo sapiens

33% id,
50% cov

CBR1_RAT / P47727: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Rattus norvegicus

30% id,
52% cov

More...

Ga0059261_2853: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

26% id,
64% cov

Ga0059261_2630: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

26% id,
65% cov

Ga0059261_2792: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

26% id,
64% cov

Ga0059261_3813: Alcohol dehydrogenase GroES-like domain
is similar to:
PaperBLAST

D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii

30% id,
52% cov

Q9HMB6: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp.

30% id,
52% cov

Q5V676: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloarcula marismortui

30% id,
47% cov

Ga0059261_3677: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

A0A0H3W5V0: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum

22% id,
47% cov

Ga0059261_4226: NADPH:quinone reductase and related Zn-dependent oxidoreductases
is similar to:
PaperBLAST

D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii

35% id,
23% cov

Ga0059261_1968: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

63% id,
10% cov

Ga0059261_2824: NADPH:quinone reductase and related Zn-dependent oxidoreductases
is similar to:
PaperBLAST

Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum

47% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 26 reading frames. Except for 8 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2247037-2248287 (frame -3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum
Also see hits to annotated proteins above

46% id,
97% cov

2774415-2776064 (frame +3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens
Also see hits to annotated proteins above

31% id,
71% cov

3015584-3016528 (frame +2) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens
Also see hits to annotated proteins above

26% id,
85% cov

3764164-3765099 (frame -3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens
Also see hits to annotated proteins above

27% id,
78% cov

2961742-2962752 (frame +1) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens
Also see hits to annotated proteins above

27% id,
72% cov

2964968-2966323 (frame -2) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

CBR1_PIG / Q28960: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Sus scrofa

26% id,
69% cov

CBR1_MOUSE / P48758: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Mus musculus
Also see hits to annotated proteins above

25% id,
63% cov

CBR1_HUMAN / P16152: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; Short chain dehydrogenase/reductase family 21C member 1; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Homo sapiens
Also see hits to annotated proteins above

29% id,
52% cov

1929633-1930802 (frame +3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii
Also see hits to annotated proteins above

29% id,
54% cov

2074520-2075302 (frame -2) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens
Also see hits to annotated proteins above

54% id,
15% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory