Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 60 curated entries in PaperBLAST's database that match '1.1.1.85' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3190: 3-isopropylmalate dehydrogenase is similar to:	PaperBLAST
LEU3_ACIFR / Q56268: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Acidithiobacillus ferrooxidans Q56268: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Acidithiobacillus ferrooxidans	59% id, 99% cov
P61494: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus	54% id, 99% cov
Q00412: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arthrospira platensis	57% id, 94% cov
P61495: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus	54% id, 99% cov
LEU3_THET8 / Q5SIY4: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Thermus thermophilus Q5SIY4: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus	54% id, 99% cov
P24098: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus aquaticus	54% id, 99% cov
P31958: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Clostridium pasteurianum	52% id, 99% cov
leuB / P24015: β-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Leptospira interrogans P24015: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Leptospira interrogans	53% id, 96% cov
LEU3_HEYCO / P12010: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Heyndrickxia coagulans	53% id, 96% cov
P43860: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Haemophilus influenzae	51% id, 99% cov
P96197: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Azotobacter vinelandii	51% id, 98% cov
P29102: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Brassica napus	58% id, 87% cov
LEU31_ARATH / Q9FMT1: 3-isopropylmalate dehydrogenase 1, chloroplastic; 3-IPM-DH 1; AtIMDH1; IMDH 1; Beta-IPM dehydrogenase 1; Isopropylmalate dehydrogenase 1; AtIMD1; Methylthioalkylmalate dehydrogenase 1; EC 1.1.1.85 from Arabidopsis thaliana IMDH3 / Q9FMT1: isopropylmalate dehydrogenase 3 (EC 1.1.1.85) from Arabidopsis thaliana Q9FMT1: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana	58% id, 86% cov
D2YZL2: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica	51% id, 98% cov
LEU33_ARATH / Q9SA14: 3-isopropylmalate dehydrogenase 3, chloroplastic; 3-IPM-DH 3; AtIMDH2; AtIMDH3; IMDH 3; Beta-IPM dehydrogenase 3; Isopropylmalate dehydrogenase 3; AtIMD3; EC 1.1.1.85 from Arabidopsis thaliana Q9SA14: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana	58% id, 87% cov
LEU32_ARATH / P93832: 3-isopropylmalate dehydrogenase 2, chloroplastic; 3-IPM-DH 2; AtIMDH2; AtIMDH3; IMDH 2; Beta-IPM dehydrogenase 2; Isopropylmalate dehydrogenase 2; AtIMD2; EC 1.1.1.85 from Arabidopsis thaliana P93832: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana	57% id, 87% cov
LEU3_SALTY / P37412: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Salmonella typhimurium P37412: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Salmonella enterica	51% id, 98% cov
Q8E9N3: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella oneidensis	51% id, 98% cov
LEU3_ECOLI / P30125: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Escherichia coli LeuB / b0073: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli leuB / P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli	51% id, 98% cov
P24404: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Agrobacterium tumefaciens	50% id, 98% cov
S2J6B8: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mucor circinelloides	48% id, 96% cov
O60027: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Eremothecium gossypii	48% id, 95% cov
P34733: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Ogataea angusta	47% id, 98% cov
P08791: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Cyberlindnera jadinii	46% id, 99% cov
Q9Y897: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Zymoseptoria tritici	45% id, 99% cov
Q6PY58: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Kazachstania humilis	46% id, 97% cov
P87256: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Aspergillus niger	45% id, 99% cov
LEU2 / P04173: 3-isopropylmalate dehydrogenase monomer (EC 1.1.1.85) from Saccharomyces cerevisiae	45% id, 97% cov
leu1 / RF\|NP_595804.2: 3-isopropylmalate dehydrogenase Leu1; EC 1.1.1.85 from Schizosaccharomyces pombe	44% id, 98% cov
AMT6_ALTAL / C9K7B7: 3-isopropylmalate dehydrogenase AMT6; AM-toxin biosynthesis protein 6; EC 1.1.1.85 from Alternaria alternata	44% id, 97% cov
P07139: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Candida maltosa	44% id, 96% cov
LEU2: 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Candida albicans	44% id, 96% cov
P54354: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Bacteroides fragilis	43% id, 99% cov
GLOI_GLAL2 / S3DB74: 3-isopropylmalate dehydrogenase gloI; L-homotyrosine biosynthesis sub-cluster protein gloI; Pneumocandin biosynthesis cluster protein I; EC 1.1.1.85 from Glarea lozoyensis	44% id, 97% cov
O94114: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Scheffersomyces stipitis	44% id, 96% cov
Q01987: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from [Candida] boidinii	43% id, 97% cov
HTYC_ASPRU / K0E689: Isopropyl malate dehydrogenase htyC; L-homotyrosine biosynthetic cluster protein C; EC 1.1.1.85 from Aspergillus rugulosus	43% id, 96% cov
LEU3_HALVD / D4GYE8: 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Haloferax volcanii	42% id, 99% cov
LEU3_METJA / Q58130: 3-isopropylmalate/3-methylmalate dehydrogenase; 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; IPMDH; Beta-IPM dehydrogenase; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.85; EC 1.1.1.n5; EC 1.1.1.83 from Methanocaldococcus jannaschii MJ0720 / Q58130: 3-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Methanocaldococcus jannaschii	40% id, 99% cov
P94929: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis	39% id, 99% cov
LEU3_MYCTU / P9WKK9: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis	39% id, 99% cov
YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli	38% id, 98% cov
hphB / B2J8P1: 2-benzyl-3-hydroxybutanedioate dehydrogenase (EC 1.1.1.85) from Nostoc punctiforme	40% id, 93% cov
Q4JB37: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfolobus acidocaldarius	36% id, 98% cov
LEU3_SULTO / P50455: 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Sulfurisphaera tokodaii P50455: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfurisphaera tokodaii	36% id, 99% cov
More...

Ga0059261_0194: isocitrate dehydrogenase (NADP) (EC 1.1.1.42) is similar to:	PaperBLAST
D2YZL2: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica	25% id, 52% cov
Q8E9N3: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella oneidensis	30% id, 35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory