Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2629: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
is similar to:

Q9HV37: L-lactate dehydrogenase (cytochrome) (EC from Pseudomonas aeruginosa

68% id,
99% cov

PS417_19130: L-lactate dehydrogenase (cytochrome) (EC from Pseudomonas simiae

67% id,
100% cov

lldD: L-lactate dehydrogenase [cytochrome]; EC from Escherichia coli

67% id,
96% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory