Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 26 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2984: 4-hydroxyphenylpyruvate dioxygenase
is similar to:

Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC from Pseudomonas stutzeri

55% id,
97% cov

LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC from Legionella pneumophila

49% id,
98% cov

Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC from uncultured soil

50% id,
95% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory