Curated BLAST
Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 21 curated entries in PaperBLAST's database that match '1.17.1.8' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
Ga0059261_2545: dihydrodipicolinate reductase (EC 1.3.1.26)
is similar to: | PaperBLAST |
Q2YJN7: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Brucella abortus | 51% id,
98% cov |
Q6G2G3: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Bartonella henselae | 45% id,
99% cov |
DAPB_ECOLI / P04036: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Escherichia coli
DapB / b0031: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli
dapB / P04036: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli | 41% id,
96% cov |
Q9K1F1: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Neisseria meningitidis | 39% id,
97% cov |
DvMF_0450: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Desulfovibrio vulgaris | 38% id,
98% cov |
DAPB_THEMA / Q9X1K8: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Thermotoga maritima | 36% id,
97% cov |
CA265_RS15670: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Pedobacter sp. | 34% id,
92% cov |
Q5HG24: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Staphylococcus aureus | 40% id,
78% cov |
DAPB_MYCTU / P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Mycobacterium tuberculosis
dapB / P9WP23: dihydropicolinate reductase subunit (EC 1.17.1.8) from Mycobacterium tuberculosis
P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Mycobacterium tuberculosis | 27% id,
99% cov |
dapB / P40110: dihydropicolinate reductase subunit (EC 1.17.1.8) from Corynebacterium glutamicum
P40110: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Corynebacterium glutamicum | 26% id,
99% cov |
dapB / P42976: dihydrodipicolinate reductase subunit (EC 1.17.1.8) from Bacillus subtilis | 31% id,
65% cov |
Echvi_2395: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Echinicola vietnamensis | 31% id,
60% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory