Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 183 curated entries in PaperBLAST's database that match '1.2.1.3'.

These curated entries have 135 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0351: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
is similar to:
PaperBLAST

Ga0059261_0351: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Sphingomonas koreensis

100% id,
100% cov

SMc01801: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Sinorhizobium meliloti

49% id,
99% cov

N515DRAFT_3769: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Dyella japonica

30% id,
99% cov

More...

Ga0059261_1680: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

58% id,
99% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

40% id,
95% cov

LUC3_FUSSX / A0A6J4B898: Aldehyde dehydrogenase LUC3; Lucilactaene biosynthesis cluster protein 3; EC 1.2.1.3 from Fusarium sp.

39% id,
98% cov

More...

Ga0059261_4132: succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

51% id,
92% cov

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

34% id,
89% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

31% id,
97% cov

More...

Ga0059261_1495: succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

48% id,
97% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

31% id,
97% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

32% id,
93% cov

More...

Ga0059261_1006: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

46% id,
99% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

46% id,
97% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

33% id,
96% cov

More...

Ga0059261_3374: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

41% id,
95% cov

AL1A1_MACFA / Q8HYE4: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Macaca fascicularis

40% id,
95% cov

AL1A1_HUMAN / P00352: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Homo sapiens
ALDH1A1 / P00352: retinal dehydrogenase 1 (EC 1.2.1.36) from Homo sapiens
P00352: retinal dehydrogenase (EC 1.2.1.36) from Homo sapiens

40% id,
95% cov

More...

Ga0059261_0516: vanillin dehydrogenase (EC 1.2.1.67)
is similar to:
PaperBLAST

ALDY_BACSU / P94358: Putative aldehyde dehydrogenase AldY; EC 1.2.1.3 from Bacillus subtilis

39% id,
96% cov

A9YD19: retinal dehydrogenase (EC 1.2.1.36) from Danio rerio

36% id,
95% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

36% id,
94% cov

More...

Ga0059261_1486: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

37% id,
97% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

38% id,
92% cov

AL3A2_MOUSE / P47740: Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 3; Fatty aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.94 from Mus musculus
P47740: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

39% id,
87% cov

More...

Ga0059261_3813: Alcohol dehydrogenase GroES-like domain
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

66% id,
53% cov

Ga0059261_2900: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

34% id,
98% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

34% id,
97% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

33% id,
98% cov

More...

Ga0059261_0846: Zn-dependent alcohol dehydrogenases, class III
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

34% id,
96% cov

Ga0059261_3926: L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

32% id,
97% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

32% id,
94% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

32% id,
95% cov

More...

Ga0059261_3677: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

32% id,
97% cov

ASC1_DIDFA / A0A5C1REZ4: Aldehyde dehydrogenase; Ascochitine biosynthesis cluster protein 1; EC 1.2.1.3 from Didymella fabae

33% id,
93% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

31% id,
99% cov

More...

Ga0059261_2605: Threonine dehydrogenase and related Zn-dependent dehydrogenases
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

28% id,
94% cov

Ga0059261_1896: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

26% id,
79% cov

Ga0059261_1819: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

31% id,
50% cov

Ga0059261_1467: Long-chain acyl-CoA synthetases (AMP-forming)
is similar to:
PaperBLAST

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

26% id,
50% cov

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

28% id,
46% cov

Ga0059261_0835: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
is similar to:
PaperBLAST

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

26% id,
43% cov

Ga0059261_4187: acyl-CoA ligase (AMP-forming), exosortase A-associated
is similar to:
PaperBLAST

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

25% id,
39% cov

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

24% id,
31% cov

Ga0059261_2530: N-acetylglutamate kinase (EC 2.7.2.8)
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

28% id,
30% cov

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

25% id,
30% cov

Ga0059261_0337: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

23% id,
33% cov

Ga0059261_0868: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
is similar to:
PaperBLAST

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis

22% id,
28% cov

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

22% id,
25% cov

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

33% id,
5% cov

Ga0059261_2433: FOG: WD40-like repeat
is similar to:
PaperBLAST

Q4L235: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Homo sapiens

25% id,
22% cov

Ga0059261_1004: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
is similar to:
PaperBLAST

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

23% id,
19% cov

Ga0059261_1313: acetyl-coenzyme A synthetase (EC 6.2.1.1)
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

27% id,
6% cov

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis

25% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 25 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3501940-3503376 (frame -3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis
Also see hits to annotated proteins above

40% id,
97% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus
P24549: retinal dehydrogenase (EC 1.2.1.36) from Mus musculus
Also see hits to annotated proteins above

40% id,
96% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus
Also see hits to annotated proteins above

39% id,
96% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory