Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 97 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_4132: succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

51% id,
92% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

31% id,
97% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

33% id,
90% cov

More...

Ga0059261_1495: succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

48% id,
97% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

31% id,
91% cov

AL7A1_BRANA / Q41247: Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Brassica turgor-responsive/drought-induced gene 26 protein; Btg-26; EC 1.2.1.3 from Brassica napus

30% id,
93% cov

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Ga0059261_1006: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

46% id,
99% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

46% id,
97% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

33% id,
91% cov

More...

Ga0059261_3374: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

41% id,
95% cov

AL1A1_MACFA / Q8HYE4: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Macaca fascicularis

40% id,
95% cov

AL1A1_HUMAN / P00352: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Homo sapiens

40% id,
95% cov

More...

Ga0059261_1680: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

LUC3_FUSSX / A0A6J4B898: Aldehyde dehydrogenase LUC3; Lucilactaene biosynthesis cluster protein 3; EC 1.2.1.3 from Fusarium sp.

39% id,
98% cov

FUS7_GIBF5 / S0ENH1: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella fujikuroi

37% id,
98% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

37% id,
98% cov

More...

Ga0059261_0516: vanillin dehydrogenase (EC 1.2.1.67)
is similar to:
PaperBLAST

ALDY_BACSU / P94358: Putative aldehyde dehydrogenase AldY; EC 1.2.1.3 from Bacillus subtilis

39% id,
96% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

35% id,
97% cov

AL1A1_BOVIN / P48644: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Bos taurus

36% id,
92% cov

More...

Ga0059261_1486: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

37% id,
97% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

38% id,
92% cov

AL3A2_MOUSE / P47740: Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 3; Fatty aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.94 from Mus musculus
P47740: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

39% id,
87% cov

More...

Ga0059261_3813: Alcohol dehydrogenase GroES-like domain
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

66% id,
53% cov

Ga0059261_2900: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

34% id,
98% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

34% id,
95% cov

AL9A1_GADMC / P56533: 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; Betaine aldehyde dehydrogenase; BADH; EC 1.2.1.47; EC 1.2.1.3 from Gadus morhua

33% id,
92% cov

More...

Ga0059261_0846: Zn-dependent alcohol dehydrogenases, class III
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

34% id,
96% cov

Ga0059261_3926: L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

32% id,
97% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

32% id,
95% cov

CITD_MONPU / Q1ERI2: Aldehyde dehydrogenase mpl4; Citrinin synthesis protein mpl4; EC 1.2.1.3 from Monascus purpureus
CITD_MONRU / A0A162J448: Aldehyde dehydrogenase citD; Citrinin synthesis protein D; EC 1.2.1.3 from Monascus ruber

29% id,
97% cov

More...

Ga0059261_3677: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

ASC1_DIDFA / A0A5C1REZ4: Aldehyde dehydrogenase; Ascochitine biosynthesis cluster protein 1; EC 1.2.1.3 from Didymella fabae

33% id,
93% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

31% id,
99% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

32% id,
95% cov

More...

Ga0059261_2605: Threonine dehydrogenase and related Zn-dependent dehydrogenases
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

28% id,
94% cov

Ga0059261_1819: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

31% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3501940-3503376 (frame -3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis
Also see hits to annotated proteins above

40% id,
97% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus
Also see hits to annotated proteins above

40% id,
96% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus
Also see hits to annotated proteins above

39% id,
96% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory