Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_3712: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 33% id, 65% cov |
| Ga0059261_2271: branched-chain alpha-keto acid dehydrogenase E2 component (EC 2.3.1.168) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 32% id, 66% cov |
| Ga0059261_2298: Prephenate dehydrogenase is similar to: | PaperBLAST |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 28% id, 67% cov |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 32% id, 41% cov |
| Ga0059261_0514: Acyl-CoA synthetase (NDP forming) is similar to: | PaperBLAST |
novF / Q9L9G2: prephenate dehydrogenase (EC 1.3.1.12) from Streptomyces niveus | 26% id, 70% cov |
| Ga0059261_2269: Prephenate dehydratase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 27% id, 43% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3826315-3827742 (frame +1) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 33% id, 67% cov |
| 1409895-1411019 (frame +3) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 54% cov |
Lawrence Berkeley National Laboratory