Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 8 curated entries in PaperBLAST's database that match '1.3.1.78' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_2298: Prephenate dehydrogenase is similar to: | PaperBLAST |
TYRA2_ARATH / Q9LMR3: Arogenate dehydrogenase 2, chloroplastic; TyrAAT2; EC 1.3.1.78 from Arabidopsis thaliana | 30% id, 67% cov |
tyrAa / P73906: arogenate dehydrogenase monomer (EC 1.3.1.78) from Synechocystis sp. | 25% id, 68% cov |
TYRA1_ARATH / Q944B6: Arogenate dehydrogenase 1, chloroplastic; TYRATC; TyrAAT1; EC 1.3.1.78 from Arabidopsis thaliana | 30% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2400221-2401912 (frame -2) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
TYRA2_ARATH / Q9LMR3: Arogenate dehydrogenase 2, chloroplastic; TyrAAT2; EC 1.3.1.78 from Arabidopsis thaliana | 30% id, 69% cov |
Lawrence Berkeley National Laboratory