Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 119 curated entries in PaperBLAST's database that match '1.5.1.2'.

These curated entries have 99 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0992: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
is similar to:
PaperBLAST

A0A0H3G3R1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Brucella suis

58% id,
94% cov

Q6N3J2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Rhodopseudomonas palustris

55% id,
97% cov

Q9A6F4: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Caulobacter vibrioides

57% id,
92% cov

More...

Ga0059261_3321: pyrroline-5-carboxylate reductase
is similar to:
PaperBLAST

CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus

43% id,
99% cov

P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa

40% id,
97% cov

G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula

36% id,
95% cov

More...

Ga0059261_3808: Pyrroline-5-carboxylate reductase
is similar to:
PaperBLAST

CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus

37% id,
99% cov

DvMF_3161: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris

33% id,
98% cov

P5CR_TREPA / P27771: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Treponema pallidum

32% id,
98% cov

More...

Ga0059261_3899: alanine dehydrogenase
is similar to:
PaperBLAST

CEO2_LACLL / P15244: N(5)-(carboxyethyl)ornithine synthase; CEOS; N(5)-(L-1-carboxyethyl)-L-ornithine:NADP(+) oxidoreductase; EC 1.5.1.24 from Lactococcus lactis
ceo / GB|AAA86385.1: N(5)-(carboxyethyl)ornithine synthase; EC 1.5.1.24 from Lactococcus lactis

25% id,
93% cov

CEO_CLOBH / A5HZ59: N(5)-(carboxyethyl)ornithine synthase; CEOS; N(5)-(L-1-carboxyethyl)-L-ornithine:NADP(+) oxidoreductase; EC 1.5.1.24 from Clostridium botulinum

26% id,
42% cov

Ga0059261_0991: Methionine synthase I (cobalamin-dependent), methyltransferase domain
is similar to:
PaperBLAST

YITJ_BACSU / O06745: Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; EC 2.1.1.10; EC 1.5.1.20 from Bacillus subtilis

30% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory