Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3321: pyrroline-5-carboxylate reductase is similar to:	PaperBLAST
CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus	43% id, 99% cov
P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa	40% id, 97% cov
G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula	36% id, 95% cov
PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare	36% id, 94% cov
F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana	35% id, 93% cov
P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans	34% id, 97% cov
P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli	32% id, 98% cov
P5CR3_HUMAN / Q53H96: Pyrroline-5-carboxylate reductase 3; P5C reductase 3; P5CR 3; Pyrroline-5-carboxylate reductase-like protein; EC 1.5.1.2 from Homo sapiens	32% id, 96% cov
Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi	31% id, 98% cov
P5CR_KLULA / Q6CR99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Kluyveromyces lactis	29% id, 98% cov
P5CR1_BACSU / P0CI77: Pyrroline-5-carboxylate reductase 1; P5C reductase 1; P5CR 1; PCA reductase 1; EC 1.5.1.2 from Bacillus subtilis	32% id, 89% cov
O87725: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Acetoanaerobium sticklandii	29% id, 98% cov
Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica	34% id, 79% cov
P5CR1_MOUSE / Q922W5: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Mus musculus	30% id, 87% cov
P5CR2_HUMAN / Q96C36: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC 1.5.1.2 from Homo sapiens Q96C36: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	31% id, 84% cov
P5CR1_HUMAN / P32322: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Homo sapiens PYCR1 / P32322: pyrroline-5-carboxylate reductase 1 subunit (EC 1.5.1.2) from Homo sapiens P32322: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	31% id, 84% cov
P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis	36% id, 72% cov
P5CR_YEAST / P32263: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Saccharomyces cerevisiae PRO3 / P32263: pyrroline-5-carboxylate reductase subunit (EC 1.5.1.2) from Saccharomyces cerevisiae	31% id, 78% cov
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Ga0059261_3808: Pyrroline-5-carboxylate reductase is similar to:	PaperBLAST
CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus	37% id, 99% cov
DvMF_3161: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	33% id, 98% cov
P5CR_TREPA / P27771: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Treponema pallidum	32% id, 98% cov
DVU2332: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	31% id, 99% cov
P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis	32% id, 98% cov
O87725: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Acetoanaerobium sticklandii	30% id, 100% cov
P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa	31% id, 96% cov
PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare	31% id, 93% cov
P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans	30% id, 96% cov
Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi	29% id, 98% cov
P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli	29% id, 99% cov
F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana	30% id, 91% cov
P5CR1_MOUSE / Q922W5: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Mus musculus	30% id, 88% cov
P5CR1_HUMAN / P32322: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Homo sapiens PYCR1 / P32322: pyrroline-5-carboxylate reductase 1 subunit (EC 1.5.1.2) from Homo sapiens P32322: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	31% id, 85% cov
P5CR3_HUMAN / Q53H96: Pyrroline-5-carboxylate reductase 3; P5C reductase 3; P5CR 3; Pyrroline-5-carboxylate reductase-like protein; EC 1.5.1.2 from Homo sapiens	28% id, 95% cov
Q97ZT3: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Saccharolobus solfataricus	28% id, 93% cov
Q5NQR9: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Zymomonas mobilis	27% id, 97% cov
P5CR2_HUMAN / Q96C36: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC 1.5.1.2 from Homo sapiens Q96C36: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	30% id, 85% cov
CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.	29% id, 90% cov
PHQD_PENFE / L0E163: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; Paraherquamide biosynthesis cluster protein D; EC 1.5.1.2 from Penicillium fellutanum	28% id, 89% cov
P5CR1_BACSU / P0CI77: Pyrroline-5-carboxylate reductase 1; P5C reductase 1; P5CR 1; PCA reductase 1; EC 1.5.1.2 from Bacillus subtilis	27% id, 92% cov
G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula	33% id, 74% cov
P5CR_KLULA / Q6CR99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Kluyveromyces lactis	28% id, 85% cov
BT3757: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Bacteroides thetaiotaomicron	23% id, 92% cov
P5CR_YEAST / P32263: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Saccharomyces cerevisiae PRO3 / P32263: pyrroline-5-carboxylate reductase subunit (EC 1.5.1.2) from Saccharomyces cerevisiae	31% id, 62% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory