Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 14 curated entries in PaperBLAST's database that match '1.5.1.34'.

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2819: Short-chain dehydrogenases of various substrate specificities
is similar to:
PaperBLAST

DHPR_HUMAN / P09417: Dihydropteridine reductase; HDHPR; Quinoid dihydropteridine reductase; Short chain dehydrogenase/reductase family 33C member 1; EC 1.5.1.34 from Homo sapiens
QDPR / P09417: Dihydropteridine reductase (EC 1.5.1.34) from Homo sapiens
P09417: 6,7-dihydropteridine reductase (EC 1.5.1.34) from Homo sapiens

35% id,
80% cov

Q8MJ30: 6,7-dihydropteridine reductase (EC 1.5.1.34) from Sus scrofa

34% id,
80% cov

DHPR_RAT / P11348: Dihydropteridine reductase; HDHPR; Quinoid dihydropteridine reductase; EC 1.5.1.34 from Rattus norvegicus

34% id,
81% cov

Ga0059261_1912: Nitroreductase
is similar to:
PaperBLAST

NFSB_ECOLI / P38489: Oxygen-insensitive NAD(P)H nitroreductase; Dihydropteridine reductase; FMN-dependent nitroreductase; EC 1.-.-.-; EC 1.5.1.34 from Escherichia coli
Ntr / b0578: NAD(P)H nitroreductase NfsB (EC 1.5.1.34) from Escherichia coli
nfnB / PDB|1OO5_A: oxygen-insensitive NAD(P)H nitroreductase; EC 1.-.-.-; EC 1.5.1.34 from Escherichia coli
nfsB / P38489: NAD(P)H-dependent nitroreductase NfsB (EC 1.6.5.2; EC 1.5.1.34) from Escherichia coli

28% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory