Curated BLAST
Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
Ga0059261_0990: methionine synthase (B12-dependent) (EC 2.1.1.13)
is similar to: | PaperBLAST |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli | 63% id,
71% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus
Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 53% id,
71% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens
MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens
Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens | 54% id,
71% cov |
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) from Phaeobacter inhibens | 34% id,
86% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 32% id,
70% cov |
PGA1_c16040: Methionine synthase component, pterin-binding domain (EC:2.1.1.13) from Phaeobacter inhibens | 30% id,
75% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 31% id,
60% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 30% id,
59% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 29% id,
60% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 32% id,
29% cov |
More... |
Ga0059261_0991: Methionine synthase I (cobalamin-dependent), methyltransferase domain
is similar to: | PaperBLAST |
PGA1_c13370: Methionine synthase component, methyltransferase domain (EC:2.1.1.13) from Phaeobacter inhibens | 28% id,
85% cov |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli | 54% id,
28% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus
Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 50% id,
28% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens
MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens
Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens | 49% id,
28% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 36% id,
36% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 33% id,
36% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 30% id,
38% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 37% id,
25% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory