Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 29 curated entries in PaperBLAST's database that match '2.1.1.14' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2929: methionine synthase (B12-independent) (EC 2.1.1.14)
is similar to:		 PaperBLAST

MetE / b3829: cobalamin-independent homocysteine transmethylase (EC 2.1.1.14) from Escherichia coli
metE: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC 2.1.1.14 from Escherichia coli
metE / P25665: cobalamin-independent homocysteine transmethylase (EC 2.1.1.14) from Escherichia coli
P25665: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Escherichia coli

 26% id,
43% cov

A0A1B2JIW1: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Komagataella pastoris

 25% id,
43% cov

METE_KALTU / C1KEU0: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Pollen allergen Sal k 3; SkMetE; Vitamin-B12-independent methionine synthase; Allergen Sal k 3.0101; EC 2.1.1.14 from Kali turgidum

 26% id,
40% cov

More...

Ga0059261_0520: Methionine synthase II (cobalamin-independent)
is similar to:		 PaperBLAST

metH: cobalamin-independent methionine synthase; EC 2.1.1.14 from Emericella nidulans

 25% id,
40% cov

METE_STRMU / Q8CWX6: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; EC 2.1.1.14 from Streptococcus mutans
Q8CWX6: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Streptococcus mutans

 23% id,
43% cov

METE_SCHPO / Q9UT19: Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; EC 2.1.1.14 from Schizosaccharomyces pombe
met26 / RF|NP_593352.1: homocysteine methyltransferase Met26; EC 2.1.1.14 from Schizosaccharomyces pombe

 25% id,
30% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

521307-522440 (frame +3) on Ga0059261_unitig_0_quiver.1
is similar to:		 PaperBLAST

METE_STRMU / Q8CWX6: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; EC 2.1.1.14 from Streptococcus mutans
Q8CWX6: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Streptococcus mutans
Also see hits to annotated proteins above

 23% id,
45% cov

Q6GYJ7: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Komagataella pastoris
Also see hits to annotated proteins above

 27% id,
24% cov

METE_CANAL / P82610: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; EC 2.1.1.14 from Candida albicans
MET6: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC 2.1.1.14 from Candida albicans
P82610: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Candida albicans
Also see hits to annotated proteins above

 27% id,
24% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory