Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 34 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0941: citrate synthase (EC
is similar to:

PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC; EC from Antarctic bacterium

34% id,
99% cov

Q9I5E3: 2-methylcitrate synthase (EC from Pseudomonas aeruginosa

34% id,
97% cov

Pf6N2E2_6062: 2-methylcitrate synthase (EC from Pseudomonas fluorescens

34% id,
97% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory