Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 197 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_1280: ATP phosphoribosyltransferase
is similar to:		 PaperBLAST

Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis

 100% id,
100% cov

AZOBR_RS19500: ATP phosphoribosyltransferase (EC 2.4.2.17) from Azospirillum brasilense

 70% id,
99% cov

BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans

 54% id,
94% cov

More...

Ga0059261_1576: 5'-deoxy-5'-methylthioadenosine phosphorylase
is similar to:		 PaperBLAST

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC 2.4.2.1) from Streptantibioticus cattleyicolor

 52% id,
93% cov

Q97W94: purine-nucleoside phosphorylase (EC 2.4.2.1); S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus

 46% id,
97% cov

pnp / Q5JEQ6: adenosine phosphorylase (EC 2.4.2.1) from Thermococcus kodakarensis

 43% id,
97% cov

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Ga0059261_3626: amidophosphoribosyltransferase (EC 2.4.2.14)
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 47% id,
98% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 48% id,
88% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 49% id,
81% cov

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Ga0059261_0061: nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19)
is similar to:		 PaperBLAST

NADC_MYCTU / P9WJJ7: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Mycobacterium tuberculosis
P9WJJ7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Mycobacterium tuberculosis

 47% id,
96% cov

NADC_SALTY / P30012: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Salmonella typhimurium

 41% id,
94% cov

NADC_ECOLI / P30011: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Escherichia coli
NadC / b0109: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli
nadC: nicotinate-nucleotide diphosphorylase, carboxylating; EC 2.4.2.19 from Escherichia coli
nadC / P30011: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli

 41% id,
93% cov

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Ga0059261_0929: anthranilate phosphoribosyltransferase
is similar to:		 PaperBLAST

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

 44% id,
95% cov

TRPD_MYCTU / P9WFX5: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Mycobacterium tuberculosis
A5U4M0: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Mycobacterium tuberculosis
P9WFX5: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Mycobacterium tuberculosis

 44% id,
88% cov

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

 42% id,
89% cov

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Ga0059261_2010: orotate phosphoribosyltransferase (EC 2.4.2.10)
is similar to:		 PaperBLAST

PYRE_THET2 / P61498: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Thermus thermophilus

 42% id,
97% cov

Q5SHI8: orotate phosphoribosyltransferase (EC 2.4.2.10) from Thermus thermophilus

 42% id,
97% cov

PYRE_HALVD / D4GZW2: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Haloferax volcanii

 29% id,
87% cov

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Ga0059261_0254: triosephosphate isomerase (EC 5.3.1.1)
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 40% id,
96% cov

Ga0059261_1457: YfiH family protein
is similar to:		 PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

 33% id,
89% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 32% id,
88% cov

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

 31% id,
85% cov

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Ga0059261_3665: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
is similar to:		 PaperBLAST

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

 25% id,
84% cov

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 23% id,
85% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 23% id,
66% cov

More...

Ga0059261_2274: ribose-phosphate pyrophosphokinase
is similar to:		 PaperBLAST

PYRE_BACSU / P25972: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus subtilis
pyrE / P25972: orotate phosphoribosyltransferase (EC 2.4.2.10) from Bacillus subtilis

 31% id,
49% cov

Ga0059261_0926: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:		 PaperBLAST

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 43% id,
34% cov

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 43% id,
34% cov

Ga0059261_3119: asparagine synthase (glutamine-hydrolyzing)
is similar to:		 PaperBLAST

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 26% id,
49% cov

Ga0059261_3222: adenine phosphoribosyltransferase (EC 2.4.2.7)
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 31% id,
28% cov

Ga0059261_4199: asparagine synthase (glutamine-hydrolyzing)
is similar to:		 PaperBLAST

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 33% id,
26% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 30% id,
27% cov

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 31% id,
26% cov

Ga0059261_3601: Predicted amidophosphoribosyltransferases
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 29% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3353695-3354237 (frame +1) on Ga0059261_unitig_0_quiver.1
is similar to:		 PaperBLAST

PYRE_BACCL / P46534: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus caldolyticus
Also see hits to annotated proteins above

 31% id,
61% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory