Curated BLAST
Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
Ga0059261_3194: Cystathionine beta-lyases/cystathionine gamma-synthases
is similar to: | PaperBLAST |
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa | 45% id,
100% cov |
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori | 37% id,
99% cov |
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis | 36% id,
100% cov |
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans | 37% id,
96% cov |
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum | 35% id,
98% cov |
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli | 33% id,
98% cov |
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum | 36% id,
68% cov |
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris | 35% id,
67% cov |
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana | 37% id,
60% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 36% id,
53% cov |
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae | 39% id,
38% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 38% id,
38% cov |
More... |
Ga0059261_1458: Cystathionine beta-lyases/cystathionine gamma-synthases
is similar to: | PaperBLAST |
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis | 37% id,
99% cov |
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum | 36% id,
97% cov |
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans | 36% id,
96% cov |
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori | 34% id,
99% cov |
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli | 34% id,
98% cov |
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum | 34% id,
72% cov |
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris | 34% id,
69% cov |
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana | 35% id,
66% cov |
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae | 28% id,
50% cov |
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae | 32% id,
38% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 30% id,
37% cov |
More... |
Ga0059261_1388: cystathionine beta-lyase, bacterial
is similar to: | PaperBLAST |
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis | 35% id,
98% cov |
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori | 34% id,
97% cov |
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans | 34% id,
97% cov |
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli | 32% id,
99% cov |
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum | 31% id,
100% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 32% id,
94% cov |
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum | 32% id,
74% cov |
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris | 32% id,
74% cov |
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana | 31% id,
71% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory