Searching in Sphingomonas koreensis DSMZ 15582 (Korea)
Found 3 curated entries in PaperBLAST's database that match '2.6.1.113' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query
| Ga0059261_3674: adenosylmethionine-8-amino-7-oxononanoate transaminase is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 29% id, 93% cov |
| Ga0059261_4131: Ornithine/acetylornithine aminotransferase is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 28% id, 88% cov |
| Ga0059261_3205: transaminase, acetylornithine/succinylornithine family is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 28% id, 88% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3339906-3341264 (frame +3) on Ga0059261_unitig_0_quiver.1 is similar to: | PaperBLAST |
SPUC_PSEAE / Q9I6J2: Putrescine--pyruvate aminotransferase; PATase; Putrescine--pyruvate transaminase; EC 2.6.1.113 from Pseudomonas aeruginosa | 27% id, 94% cov |
Lawrence Berkeley National Laboratory