Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 26 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3205: transaminase, acetylornithine/succinylornithine family is similar to:	PaperBLAST
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa	42% id, 96% cov
Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis	34% id, 91% cov
Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis	37% id, 84% cov
OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis	33% id, 92% cov
OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus P04182: ornithine aminotransferase (EC 2.6.1.13) from Rattus norvegicus	35% id, 86% cov
OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum	33% id, 89% cov
OAT_HUMAN / P04181: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Homo sapiens OAT / P04181: Ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens P04181: ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens	35% id, 86% cov
OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans	34% id, 85% cov
OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae	31% id, 93% cov
OAT_SCHPO / Q9P7L5: Ornithine aminotransferase car2; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Schizosaccharomyces pombe car2 / RF\|NP_596588.1: ornithine transaminase Car2; EC 2.6.1.13 from Schizosaccharomyces pombe	32% id, 89% cov
OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis	32% id, 89% cov
Q2Z0F8: ornithine aminotransferase (EC 2.6.1.13) from Agaricus bisporus	33% id, 86% cov
B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum	33% id, 81% cov
OAT_ORYSJ / Q10G56: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Oryza sativa	33% id, 80% cov
OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana	33% id, 79% cov
P31893: ornithine aminotransferase (EC 2.6.1.13) from Vigna aconitifolia	31% id, 81% cov
δOAT / Q1RPP3: ornithine δ-aminotransferase (EC 2.6.1.13) from Pinus sylvestris	32% id, 77% cov
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis	33% id, 48% cov
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis	33% id, 32% cov
More...

Ga0059261_4131: Ornithine/acetylornithine aminotransferase is similar to:	PaperBLAST
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa	43% id, 93% cov
OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis	35% id, 95% cov
OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae	36% id, 91% cov
OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis	34% id, 93% cov
Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis	35% id, 87% cov
Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis	33% id, 93% cov
OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans	34% id, 89% cov
OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus P04182: ornithine aminotransferase (EC 2.6.1.13) from Rattus norvegicus	34% id, 87% cov
OAT_HUMAN / P04181: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Homo sapiens OAT / P04181: Ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens P04181: ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens	34% id, 86% cov
OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum	32% id, 91% cov
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis	32% id, 91% cov
B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum	35% id, 81% cov
OAT_SCHPO / Q9P7L5: Ornithine aminotransferase car2; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Schizosaccharomyces pombe car2 / RF\|NP_596588.1: ornithine transaminase Car2; EC 2.6.1.13 from Schizosaccharomyces pombe	33% id, 87% cov
δOAT / Q1RPP3: ornithine δ-aminotransferase (EC 2.6.1.13) from Pinus sylvestris	33% id, 85% cov
Q2Z0F8: ornithine aminotransferase (EC 2.6.1.13) from Agaricus bisporus	34% id, 82% cov
OAT_ORYSJ / Q10G56: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Oryza sativa	33% id, 84% cov
OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana	33% id, 80% cov
P31893: ornithine aminotransferase (EC 2.6.1.13) from Vigna aconitifolia	33% id, 74% cov
More...

Ga0059261_3674: adenosylmethionine-8-amino-7-oxononanoate transaminase is similar to:	PaperBLAST
OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis	28% id, 95% cov
Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis	28% id, 95% cov
OAT_SCHPO / Q9P7L5: Ornithine aminotransferase car2; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Schizosaccharomyces pombe car2 / RF\|NP_596588.1: ornithine transaminase Car2; EC 2.6.1.13 from Schizosaccharomyces pombe	29% id, 92% cov
OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum	27% id, 93% cov
OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana	30% id, 83% cov
OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans	27% id, 88% cov
B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum	28% id, 85% cov
Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis	27% id, 87% cov
OAT_HUMAN / P04181: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Homo sapiens OAT / P04181: Ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens P04181: ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens	27% id, 87% cov
δOAT / Q1RPP3: ornithine δ-aminotransferase (EC 2.6.1.13) from Pinus sylvestris	28% id, 84% cov
OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus P04182: ornithine aminotransferase (EC 2.6.1.13) from Rattus norvegicus	26% id, 87% cov
OAT_ORYSJ / Q10G56: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Oryza sativa	27% id, 82% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory