Curated BLAST for Genomes


Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 27 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2265: phosphoserine aminotransferase apoenzyme (EC
is similar to:

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC; EC from Methanosarcina acetivorans

60% id,
99% cov

SERC_METBF / P52878: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC from Methanosarcina barkeri
P52878: phosphoserine transaminase (EC from Methanosarcina barkeri

59% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory