Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 961 curated entries in PaperBLAST's database that match '2.7.1.1'.

These curated entries have 617 distinct sequences.

Running ublast with E ≤ 0.01

Found 29 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_2144: thymidine kinase (EC 2.7.1.21)
is similar to:
PaperBLAST

Tdk / b1238: thymidine/deoxyuridine kinase (EC 2.7.1.145; EC 2.7.1.21) from Escherichia coli
tdk / P23331: thymidine/deoxyuridine kinase (EC 2.7.1.145) from Escherichia coli

57% id,
94% cov

Ga0059261_0631: adenosylcobinamide kinase (EC 2.7.1.156)/adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
is similar to:
PaperBLAST

cobP / P29931: CobP (EC 2.7.1.156; EC 2.7.7.62) from Sinorhizobium sp.

55% id,
95% cov

CobU / b1993: cobinamide-P guanylyltransferase / cobinamide kinase (EC 2.7.7.62; EC 2.7.1.156) from Escherichia coli
cobU / RF|NP_416497: bifunctional adenosylcobalamin biosynthesis protein CobU; EC 2.7.1.156; EC 2.7.7.62 from Escherichia coli

45% id,
100% cov

COBU_SALTY / Q05599: Bifunctional adenosylcobalamin biosynthesis protein CobU; Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase; EC 2.7.1.156; EC 2.7.7.62 from Salmonella typhimurium
cobU / Q05599: adenosylcobinamide-phosphate guanylyltransferase subunit (EC 2.7.1.156; EC 2.7.7.62) from Salmonella typhimurium

44% id,
100% cov

Ga0059261_0568: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae

45% id,
99% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

43% id,
99% cov

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

44% id,
98% cov

More...

Ga0059261_1647: PTS system, N-acetylglucosamine-specific IIBC component
is similar to:
PaperBLAST

PTGCB_SALTY / P37439: PTS system glucose-specific EIICB component; EIICB-Glc; EII-Glc; EC 2.7.1.199 from Salmonella typhimurium

42% id,
98% cov

PTGCB_ECOLI / P69786: PTS system glucose-specific EIICB component; EIICB-Glc; EII-Glc; EC 2.7.1.199 from Escherichia coli
PtsG / b1101: glucose-specific PTS enzyme IIBC component (EC 2.7.1.199) from Escherichia coli
ptsG / P69786: glucose-specific PTS enzyme IIBC component (EC 2.7.1.199) from Escherichia coli
P69786: protein-Npi-phosphohistidine-D-glucose phosphotransferase (EC 2.7.1.199) from Escherichia coli

41% id,
98% cov

P45604: protein-Npi-phosphohistidine-N-acetyl-D-glucosamine phosphotransferase (EC 2.7.1.193) from Klebsiella pneumoniae

45% id,
82% cov

More...

Ga0059261_4213: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)
is similar to:
PaperBLAST

ISPE_THET8 / P83700: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; CMK; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase; EC 2.7.1.148 from Thermus thermophilus

39% id,
93% cov

P9WKG7: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) from Mycobacterium tuberculosis

38% id,
85% cov

Ipk / b1208: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) from Escherichia coli
ispE / PDB|1OJ4: 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase; EC 2.7.1.148 from Escherichia coli
ispE / P62615: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) from Escherichia coli
P62615: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) from Escherichia coli

35% id,
92% cov

More...

Ga0059261_2965: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

kdgK / Q9WXS2: 2-keto-3-deoxygluconate kinase (EC 2.7.1.178) from Thermotoga maritima

36% id,
99% cov

KDGK1_HALVD / D4GSE6: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxygluconate/2-keto-3-deoxygalactonate kinase; KDG kinase; KDGK-1; EC 2.7.1.178 from Haloferax volcanii
D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

32% id,
99% cov

D4GR05: 6-phosphofructokinase (EC 2.7.1.11); 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Haloferax volcanii

30% id,
98% cov

More...

Ga0059261_1624: 2-keto-3-deoxy-galactonokinase
is similar to:
PaperBLAST

YidV / b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli
dgoK / P31459: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178) from Escherichia coli

36% id,
97% cov

Ga0059261_0355: glucokinase, proteobacterial type
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

34% id,
96% cov

Ga0059261_1256: Membrane-associated lipoprotein involved in thiamine biosynthesis
is similar to:
PaperBLAST

APBE_VIBC3 / A5F5Y3: FAD:protein FMN transferase; Flavin transferase; EC 2.7.1.180 from Vibrio cholerae
apbE / A5F5Y3: flavin transferase (EC 2.7.1.180) from Vibrio cholerae

36% id,
88% cov

APBE_ECOLI / P0AB85: FAD:protein FMN transferase; Flavin transferase; EC 2.7.1.180 from Escherichia coli
YojK / b2214: FAD:protein FMN transferase (EC 2.7.1.180) from Escherichia coli
ftp / P0AB85: FAD:protein FMN transferase (EC 2.7.1.180) from Escherichia coli

31% id,
89% cov

APBE_SALTY / P41780: FAD:protein FMN transferase; Flavin transferase; EC 2.7.1.180 from Salmonella typhimurium

31% id,
90% cov

More...

Ga0059261_4024: Predicted phosphotransferase related to Ser/Thr protein kinases
is similar to:
PaperBLAST

amgK / Q88QT3: N-acetyl-D-muramate 1-kinase (EC 2.7.1.162; EC 2.7.1.221) from Pseudomonas putida

35% id,
90% cov

Ga0059261_1646: Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9)/PTS system IIA component, Glc family (TC 4.A.1)
is similar to:
PaperBLAST

Crr / b2417: Enzyme IIAGlc (EC 2.7.1.199; EC 2.7.1.201; EC 2.7.1.192) from Escherichia coli
Crr / P69783: Enzyme IIAGlc (EC 2.7.1.199) from Escherichia coli

42% id,
73% cov

DHAM_KLEOK / A0A0H3H456: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Klebsiella oxytoca

29% id,
95% cov

DHAM_PANAM / D4GL26: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Pantoea ananatis

28% id,
95% cov

More...

Ga0059261_4061: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

RIFN_AMYMS / G0FS68: Kanosamine kinase; EC 2.7.1.179 from Amycolatopsis mediterranei
G0FS68: kanosamine kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

31% id,
95% cov

rifN / O52554: kanosamine 6-kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

31% id,
93% cov

glk / Q8DVE8: glucokinase subunit (EC 2.7.1.1) from Streptococcus mutans

28% id,
85% cov

More...

Ga0059261_1776: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

30% id,
96% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

30% id,
96% cov

RIFN_AMYMS / G0FS68: Kanosamine kinase; EC 2.7.1.179 from Amycolatopsis mediterranei
G0FS68: kanosamine kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

28% id,
100% cov

More...

Ga0059261_0833: Glycerol kinase
is similar to:
PaperBLAST

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

29% id,
98% cov

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

29% id,
94% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

25% id,
88% cov

More...

Ga0059261_2623: Glycerol kinase
is similar to:
PaperBLAST

Dshi_1997: Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae

29% id,
96% cov

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

27% id,
97% cov

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

26% id,
98% cov

More...

Ga0059261_1775: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

rifN / O52554: kanosamine 6-kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

28% id,
100% cov

RIFN_AMYMS / G0FS68: Kanosamine kinase; EC 2.7.1.179 from Amycolatopsis mediterranei
G0FS68: kanosamine kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

28% id,
79% cov

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

30% id,
63% cov

More...

Ga0059261_1055: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

Q9YG89: 6-phosphofructokinase (EC 2.7.1.11) from Aeropyrum pernix

26% id,
97% cov

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

24% id,
94% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

28% id,
79% cov

More...

Ga0059261_1366: lipid kinase, YegS/Rv2252/BmrU family
is similar to:
PaperBLAST

DAGK_BACSU / O31502: Diacylglycerol kinase; DAG kinase; DAGK; EC 2.7.1.107 from Bacillus subtilis

26% id,
97% cov

DAGK_STAAR / Q6GFF9: Diacylglycerol kinase; DAG kinase; DAGK; EC 2.7.1.107 from Staphylococcus aureus
dagK / Q6GFF9: diacylglycerol kinase monomer (EC 2.7.1.107) from Staphylococcus aureus
Q6GFF9: diacylglycerol kinase (ATP) (EC 2.7.1.107) from Staphylococcus aureus

25% id,
93% cov

Ga0059261_0628: L-threonine O-3-phosphate decarboxylase (EC 4.1.1.81)
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

26% id,
73% cov

Ga0059261_2299: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

26% id,
70% cov

Ga0059261_1954: phosphoglucosamine mutase (EC 5.4.2.10)
is similar to:
PaperBLAST

PGM2L_MOUSE / Q8CAA7: Glucose 1,6-bisphosphate synthase; Phosphoglucomutase-2-like 1; EC 2.7.1.106 from Mus musculus

26% id,
64% cov

PGM2L_HUMAN / Q6PCE3: Glucose 1,6-bisphosphate synthase; PMMLP; Phosphoglucomutase-2-like 1; EC 2.7.1.106 from Homo sapiens

25% id,
64% cov

Ga0059261_0918: Phosphotransferase system, mannose/fructose-specific component IIA
is similar to:
PaperBLAST

PTNAB_ECOLI / P69797: PTS system mannose-specific EIIAB component; EIIAB-Man; EIII-Man; EC 2.7.1.191 from Escherichia coli
ManX / b1817: mannose-specific PTS enzyme IIAB component (EC 2.7.1.191; EC 2.7.1.199; EC 2.7.1.193) from Escherichia coli

34% id,
42% cov

Q9S4L5: protein-Npi-phosphohistidine-D-mannose phosphotransferase (EC 2.7.1.191) from Streptococcus salivarius

29% id,
38% cov

Ga0059261_3592: shikimate kinase (EC 2.7.1.71)
is similar to:
PaperBLAST

RR42_RS06130: Gluconokinase (EC 2.7.1.12) from Cupriavidus basilensis

51% id,
21% cov

BPHYT_RS16720: Gluconokinase (EC 2.7.1.12) from Burkholderia phytofirmans

45% id,
22% cov

Ga0059261_2190: PTS IIA-like nitrogen-regulatory protein PtsN
is similar to:
PaperBLAST

MNGA_ECOLI / P54745: PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component; 2-O-alpha-mannosyl-D-glycerate-specific phosphotransferase enzyme MngA; Protein-Npi-phosphohistidine--2-O-alpha-mannosyl-D-glycerate phosphotransferase; EC 2.7.1.195 from Escherichia coli
MngA: 2-O-α-mannosyl-D-glycerate specific PTS enzyme II (EC 2.7.1.195) from Escherichia coli
MngA / P54745: 2-O-α-mannosyl-D-glycerate specific PTS enzyme II (EC 2.7.1.195) from Escherichia coli
P54745: protein-Npi-phosphohistidine-2-O-alpha-mannosyl-D-glycerate phosphotransferase (EC 2.7.1.195) from Escherichia coli

33% id,
20% cov

Ga0059261_0919: Phosphotransferase System HPr (HPr) Family
is similar to:
PaperBLAST

DHAM_PANAM / D4GL26: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Pantoea ananatis

34% id,
18% cov

Ga0059261_0883: hypothetical protein
is similar to:
PaperBLAST

DGKK_HUMAN / Q5KSL6: Diacylglycerol kinase kappa; DAG kinase kappa; DGK-kappa; 142 kDa diacylglycerol kinase; Diglyceride kinase kappa; EC 2.7.1.107 from Homo sapiens
Q5KSL6: diacylglycerol kinase (ATP) (EC 2.7.1.107) from Homo sapiens

30% id,
9% cov

Ga0059261_3394: hypothetical protein
is similar to:
PaperBLAST

DGKK_HUMAN / Q5KSL6: Diacylglycerol kinase kappa; DAG kinase kappa; DGK-kappa; 142 kDa diacylglycerol kinase; Diglyceride kinase kappa; EC 2.7.1.107 from Homo sapiens
Q5KSL6: diacylglycerol kinase (ATP) (EC 2.7.1.107) from Homo sapiens

28% id,
10% cov

Ga0059261_2615: Tetratricopeptide repeat/TPR repeat
is similar to:
PaperBLAST

DGKK_HUMAN / Q5KSL6: Diacylglycerol kinase kappa; DAG kinase kappa; DGK-kappa; 142 kDa diacylglycerol kinase; Diglyceride kinase kappa; EC 2.7.1.107 from Homo sapiens
Q5KSL6: diacylglycerol kinase (ATP) (EC 2.7.1.107) from Homo sapiens

34% id,
6% cov

Ga0059261_0275: hypothetical protein
is similar to:
PaperBLAST

DGKK_HUMAN / Q5KSL6: Diacylglycerol kinase kappa; DAG kinase kappa; DGK-kappa; 142 kDa diacylglycerol kinase; Diglyceride kinase kappa; EC 2.7.1.107 from Homo sapiens
Q5KSL6: diacylglycerol kinase (ATP) (EC 2.7.1.107) from Homo sapiens

44% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 29 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1732966-1735473 (frame +1) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

Crr / b2417: Enzyme IIAGlc (EC 2.7.1.199; EC 2.7.1.201; EC 2.7.1.192) from Escherichia coli
Crr / P69783: Enzyme IIAGlc (EC 2.7.1.199) from Escherichia coli
Also see hits to annotated proteins above

40% id,
76% cov

2298817-2299416 (frame -3) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

MNGA_ECOLI / P54745: PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component; 2-O-alpha-mannosyl-D-glycerate-specific phosphotransferase enzyme MngA; Protein-Npi-phosphohistidine--2-O-alpha-mannosyl-D-glycerate phosphotransferase; EC 2.7.1.195 from Escherichia coli
MngA: 2-O-α-mannosyl-D-glycerate specific PTS enzyme II (EC 2.7.1.195) from Escherichia coli
MngA / P54745: 2-O-α-mannosyl-D-glycerate specific PTS enzyme II (EC 2.7.1.195) from Escherichia coli
P54745: protein-Npi-phosphohistidine-2-O-alpha-mannosyl-D-glycerate phosphotransferase (EC 2.7.1.195) from Escherichia coli
Also see hits to annotated proteins above

32% id,
24% cov

924336-925163 (frame -1) on Ga0059261_unitig_0_quiver.1
is similar to:
PaperBLAST

DGKK_HUMAN / Q5KSL6: Diacylglycerol kinase kappa; DAG kinase kappa; DGK-kappa; 142 kDa diacylglycerol kinase; Diglyceride kinase kappa; EC 2.7.1.107 from Homo sapiens
Q5KSL6: diacylglycerol kinase (ATP) (EC 2.7.1.107) from Homo sapiens
Also see hits to annotated proteins above

32% id,
10% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory