Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0568: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae

45% id,
99% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

43% id,
99% cov

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

44% id,
98% cov

More...

Ga0059261_1055: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

24% id,
94% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

28% id,
79% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

27% id,
80% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory