Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0833: Glycerol kinase
is similar to:
PaperBLAST

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

29% id,
98% cov

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

29% id,
94% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

25% id,
88% cov

More...

Ga0059261_2623: Glycerol kinase
is similar to:
PaperBLAST

Dshi_1997: Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae

29% id,
96% cov

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

29% id,
92% cov

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

27% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory