Curated BLAST for Genomes

 

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 49 curated entries in PaperBLAST's database that match '2.7.1.8'.

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_0355: glucokinase, proteobacterial type
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

34% id,
96% cov

Ga0059261_3619: Predicted sugar kinase
is similar to:
PaperBLAST

POS5_SCHPO / Q9UT98: NADH kinase pos5, mitochondrial; EC 2.7.1.86 from Schizosaccharomyces pombe

31% id,
55% cov

C7GJD6: NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

29% id,
49% cov

POS5_YEAST / Q06892: NADH kinase POS5, mitochondrial; EC 2.7.1.86 from Saccharomyces cerevisiae
Q06892: NAD+ kinase (EC 2.7.1.23); NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

29% id,
49% cov

More...

Ga0059261_4061: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua

30% id,
48% cov

BGLK_LISMO / Q8Y3R9: Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes

30% id,
48% cov

Ga0059261_1776: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua

28% id,
50% cov

BGLK_LISMO / Q8Y3R9: Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes

26% id,
48% cov

Ga0059261_1055: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

40% id,
35% cov

Ga0059261_3161: tol-pal system-associated acyl-CoA thioesterase
is similar to:
PaperBLAST

YOW5_SCHPO / Q9USY1: Pseudouridine-metabolizing bifunctional protein C1861.05; EC 4.2.1.70; EC 2.7.1.83 from Schizosaccharomyces pombe

38% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory