Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sphingomonas koreensis DSMZ 15582 (Korea)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sphingomonas koreensis DSMZ 15582, or try another query

Ga0059261_3309: formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) is similar to:	PaperBLAST
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli	55% id, 97% cov

Ga0059261_2551: Acetate kinase is similar to:	PaperBLAST
G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum	33% id, 98% cov
ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis	31% id, 97% cov
P9WQH1: acetate kinase (EC 2.7.2.1) from Mycobacterium tuberculosis	35% id, 85% cov
E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.	33% id, 91% cov
ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli ackA / RF\|NP_416799: acetate kinase; EC 2.7.2.1 from Escherichia coli P0A6A5: acetate kinase (EC 2.7.2.1) from Escherichia coli P0A6A3: acetate kinase (EC 2.7.2.1) from Escherichia coli	33% id, 90% cov
ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC 2.7.2.1 from Salmonella typhimurium P63411: acetate kinase (EC 2.7.2.1) from Salmonella enterica	33% id, 90% cov
YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli	34% id, 87% cov
ACKA_CORGL / P77845: Acetate kinase; Acetokinase; EC 2.7.2.1 from Corynebacterium glutamicum	33% id, 89% cov
B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis	33% id, 87% cov
ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima ackA / PDB\|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima	32% id, 90% cov
Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis	33% id, 87% cov
A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	33% id, 87% cov
P0CW05: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	33% id, 87% cov
P0CW04: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	33% id, 87% cov
ACKA_METTE / P38502: Acetate kinase; Acetokinase; EC 2.7.2.1 from Methanosarcina thermophila P38502: acetate kinase (EC 2.7.2.1) from Methanosarcina thermophila	31% id, 87% cov
A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	31% id, 85% cov
J9W3A6: acetate kinase (EC 2.7.2.1) from Cryptococcus neoformans	30% id, 88% cov
C4M1C3: acetate kinase (EC 2.7.2.1); acetate kinase (diphosphate) (EC 2.7.2.12) from Entamoeba histolytica	30% id, 86% cov
P75245: acetate kinase (EC 2.7.2.1) from Mycoplasma pneumoniae	36% id, 63% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory